Raptor 3.0.0-rc.1
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
 
precompute_correction.cpp File Reference

Implements raptor::threshold::precompute_correction. More...

#include <fstream>
#include <cereal/types/vector.hpp>
#include <raptor/threshold/logspace.hpp>
#include <raptor/threshold/pascal_row.hpp>
#include <raptor/threshold/precompute_correction.hpp>
+ Include dependency graph for precompute_correction.cpp:

Functions

std::string const raptor::threshold::correction_filename (threshold_parameters const &arguments)
 
std::vector< size_t > raptor::threshold::precompute_correction (threshold_parameters const &arguments)
 
bool raptor::threshold::read_correction (std::vector< size_t > &vec, threshold_parameters const &arguments)
 
void raptor::threshold::write_correction (std::vector< size_t > const &vec, threshold_parameters const &arguments)
 

Detailed Description

Implements raptor::threshold::precompute_correction.

Author
Enrico Seiler <enrico.seiler AT fu-berlin.de>