Raptor 3.0.0-rc.1
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
 
compute_kmers.cpp File Reference

Implements raptor::hibf::compute_kmers. More...

#include <seqan3/search/views/minimiser_hash.hpp>
#include <raptor/adjust_seed.hpp>
#include <raptor/build/hibf/compute_kmers.hpp>
#include <raptor/file_reader.hpp>
+ Include dependency graph for compute_kmers.cpp:

Namespaces

namespace  raptor::hibf
 Must be first include.
 

Functions

void raptor::hibf::compute_kmers (robin_hood::unordered_flat_set< size_t > &kmers, build_arguments const &arguments, chopper_pack_record const &record)
 

Detailed Description

Implements raptor::hibf::compute_kmers.

Author
Enrico Seiler <enrico.seiler AT fu-berlin.de>