Raptor 3.0.0-rc.1
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
 
Class List
Here are the classes, structs, unions and interfaces with brief descriptions:
[detail level 123]
 ▼Nraptor
 ▼NhibfMust be first include
 Cbuild_data
 Cchopper_pack_record
 Cnode_data
 ▼Nlogspace
 Cadd_fn
 ▼Nthreshold
 Cforward_strand_minimiser
 Cthreshold
 Cthreshold_parameters
 Cbin_validator
 Cbuild_arguments
 Ccutoff
 Cdna4_traits
 Cfile_reader
 Cfile_reader< file_types::minimiser >
 Cfile_reader< file_types::sequence >
 ▼Chierarchical_interleaved_bloom_filterThe HIBF binning directory. A data structure that efficiently answers set-membership queries for multiple bins
 Ccounting_agent_typeManages counting ranges of values for the raptor::hierarchical_interleaved_bloom_filter
 Cmembership_agentManages membership queries for the raptor::hierarchical_interleaved_bloom_filter
 Cuser_binsBookkeeping for user and technical bins
 Cindex_factory
 Cindex_upgrader
 Coutput_directory_validator
 Coutput_file_validator
 Cpartition_config
 Cpositive_integer_validator
 Cpower_of_two_validator
 Cprepare_arguments
 Craptor_index
 Csearch_arguments
 Csequence_file_validator
 Csize_validator
 Csync_out
 Ctimer
 Cupgrade_arguments
 CwindowStrong type for passing the window size